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What is Chloroform Used for Clearing Of?

Published in Tissue Clearing 2 mins read

Chloroform is primarily utilized as a clearing agent in tissue processing, specifically for decalcified hard bone. This application is particularly valuable in special cases where maintaining the tissue's softness after infiltration is crucial.

Understanding Tissue Clearing

In histology and pathology, tissue clearing is a critical step in preparing biological samples for microscopic examination. After dehydration, where water is removed from the tissue, a clearing agent is used to displace the dehydrating alcohol. This step makes the tissue transparent and miscible with the subsequent embedding medium, typically paraffin wax. A well-cleared tissue allows for proper infiltration of wax, leading to a robust block suitable for sectioning into thin slices.

For more details on the overall process, you can refer to resources on tissue processing in histology.

Specific Application of Chloroform

While many clearing agents exist, chloroform finds its niche in specialized scenarios:

  • Decalcified Hard Bone: Chloroform is particularly effective for clearing bone samples that have undergone decalcification. It aids in preparing these dense, treated tissues for wax infiltration.
  • Tissue Softness Retention: One notable advantage of using chloroform in these specific cases is that it helps the decalcified hard bone remain relatively soft after the infiltration process, which can be beneficial for subsequent handling and sectioning.

Disadvantages and Limitations

Despite its utility in niche applications, chloroform has significant drawbacks that limit its widespread use, particularly in modern laboratories:

  • Material Compatibility: Chloroform is highly corrosive to certain materials, specifically rubber and various plastics.
  • Incompatibility with Automated Processors: Due to its corrosive nature, chloroform cannot be used in most modern automatic tissue processors. The seals and components within these machines, often made of rubber or plastic, would be severely damaged or destroyed by chloroform, leading to equipment failure. This limitation makes it impractical for high-throughput or automated tissue processing workflows.

Summary of Chloroform as a Clearing Agent

Aspect Description
Primary Use Clearing decalcified hard bone.
Benefit Helps retain relative softness of tissue after infiltration, beneficial for special cases.
Disadvantage Attacks rubber and plastics, making it unsuitable for most modern automatic tissue processors.
Overall A useful clearant for specific, manual applications, but largely replaced by alternatives in automated labs.